TmCalculator

Melting Temperature of Nucleic Acid Sequences

Last update: 21 February 2022

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 1.0.3

Cites work

DIRECT DETECTION OF HAEMOGLOBIN E WITH SYNTHETIC OLIGONUCLEOTIDES
Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature
Dependence of the melting temperature of DNA on salt concentration
DNA Probes: Applications of the Principles of Nucleic Acid Hybridization
Primer3—new capabilities and interfaces
Oligonucleotide Melting Temperatures under PCR Conditions: Nearest-Neighbor Corrections for Mg2+, Deoxynucleotide Triphosphate, and Dimethyl Sulfoxide Concentrations with Comparison to Alternative Empirical Formulas
Predicting DNA duplex stability from the base sequence.
Improved Thermodynamic Parameters and Helix Initiation Factor to Predict Stability of DNA Duplexes
Thermodynamics of internal C.T mismatches in DNA
The Thermodynamics of DNA Structural Motifs
Improved free-energy parameters for predictions of RNA duplex stability.
Thermodynamic Parameters for an Expanded Nearest-Neighbor Model for Formation of RNA Duplexes with Watson−Crick Base Pairs
Testing the Nearest Neighbor Model for Canonical RNA Base Pairs: Revision of GU Parameters
Thermodynamic parameters for DNA sequences with dangling ends
NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
Contamination and specific accumulation of organochlorine and butyltin compounds in deep-sea organisms collected from Suruga Bay, Japan
Thermodynamics and NMR of Internal G·T Mismatches in DNA
Nearest-neighbor thermodynamics of deoxyinosine pairs in DNA duplexes
Improved Nearest-Neighbor Parameters for Predicting DNA Duplex Stability
A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
Effects of Sodium Ions on DNA Duplex Oligomers: Improved Predictions of Melting Temperatures
Predicting Stability of DNA Duplexes in Solutions Containing Magnesium and Monovalent Cations