SIRmcmc

Compartmental Susceptible-Infectious-Recovered (SIR) Model of Community and Household Infection

Last update: 11 January 2024

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 1.1, 1.1.1

Description

We build an Susceptible-Infectious-Recovered (SIR) model where the rate of infection is the sum of the household rate and the community rate. We estimate the posterior distribution of the parameters using the Metropolis algorithm. Further details may be found in: F Scott Dahlgren, Ivo M Foppa, Melissa S Stockwell, Celibell Y Vargas, Philip LaRussa, Carrie Reed (2021) "Household transmission of influenza A and B within a prospective cohort during the 2013-2014 and 2014-2015 seasons" <doi:10.1002/sim.9181>.

Cites work

Household transmission of influenza A and B within a prospective cohort during the 2013‐2014 and 2014‐2015 seasons

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