SCORPIUS

Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data

Last update: 7 August 2023

Copyright license: GNU General Public License, version 3.0

Software version identifier: 1.0.8, 1.0.2, 1.0.3, 1.0.4.1, 1.0.4, 1.0.5, 1.0.6, 1.0.7, 1.0, 1.0.9

Description

An accurate and easy tool for performing linear trajectory inference on single cells using single-cell RNA sequencing data. In addition, 'SCORPIUS' provides functions for discovering the most important genes with respect to the reconstructed trajectory, as well as nice visualisation tools. Cannoodt et al. (2016) <doi:10.1101/079509>.

Cites work

SCORPIUS improves trajectory inference and identifies novel modules in dendritic cell development

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