directPA

CRANdirectPAMaRDI QIDQ133040

Direction Analysis for Pathways and Kinases

No author found.

Last update: 16 November 2023

Software version identifier: 1.5, 1.0, 1.1, 1.2, 1.3, 1.4, 1.5.1

Copyright license: GNU General Public License, version 3.0

Description

Direction analysis is a set of tools designed to identify combinatorial effects of multiple treatments/conditions on pathways and kinases profiled by microarray, RNA-seq, proteomics, or phosphoproteomics data. See Yang P et al (2014) <doi:10.1093/bioinformatics/btt616>; and Yang P et al. (2016) <doi:10.1002/pmic.201600068>.

Cites work

• Direction pathway analysis of large-scale proteomics data reveals novel features of the insulin action pathway
• KinasePA: Phosphoproteomics data annotation using hypothesis driven kinase perturbation analysis