MLMOI

CRANMLMOIMaRDI QIDQ141419FDOQ141419

Estimating Frequencies, Prevalence and Multiplicity of Infection

Meraj Hashemi, Kristan Alexander Schneider

Last update: 21 December 2023

Copyright license: GNU General Public License, version 3.0

Software version identifier: 0.1.1, 0.1.2

Description

The implemented methods reach out to scientists that seek to estimate multiplicity of infection (MOI) and lineage (allele) frequencies and prevalences at molecular markers using the maximum-likelihood method described in Schneider (2018) <doi:10.1371/journal.pone.0194148>, and Schneider and Escalante (2014) <doi:10.1371/journal.pone.0097899>. Users can import data from Excel files in various formats, and perform maximum-likelihood estimation on the imported data by the package's moimle() function.

Cites work

• Large and finite sample properties of a maximum-likelihood estimator for multiplicity of infection
• A Likelihood Approach to Estimate the Number of Co-Infections

This page was built for software: MLMOI