blaster

MaRDI QIDQ158981CRANFDO

Authors Timothy R. Julian, Manu V Tamminen, Aditya Jeevennavar, Steven Schmid

Last update 22 August 2023

Copyright license 3-clause BSD License, File License

Software version identifier 1.0.6, 1.0.3, 1.0.4, 1.0, 1.0.7

Description

Implementation of an efficient BLAST-like sequence comparison algorithm, written in 'C++11' and using native R datatypes. Blaster is based on 'nsearch' - Schmid et al (2018) <doi:10.1101/399782>.

Cites work

• nsearch: An open source C++ library for processing and similarity searching of next-generation sequencing data

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