brsim

Brainerd-Robinson Similarity Coefficient Matrix

Last update: 12 December 2023

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 0.1, 0.2, 0.3

Description

Provides the facility to calculate the Brainerd-Robinson similarity coefficient for the rows of an input table, and to calculate the significance of each coefficient based on a permutation approach; a heatmap is produced to visually represent the similarity matrix. Optionally, hierarchical agglomerative clustering can be performed and the silhouette method is used to identify an optimal number of clusters; the results of the clustering can be optionally used to sort the heatmap.

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