Functions for causal structure learning and causal inference using graphical models. The main algorithms for causal structure learning are PC (for observational data without hidden variables), FCI and RFCI (for observational data with hidden variables), and GIES (for a mix of data from observational studies (i.e. observational data) and data from experiments involving interventions (i.e. interventional data) without hidden variables). For causal inference the IDA algorithm, the Generalized Backdoor Criterion (GBC), the Generalized Adjustment Criterion (GAC) and some related functions are implemented. Functions for incorporating background knowledge are provided.
Cited in
(only showing first 100 items - show all)- trigger
- DREAM4
- micd
- tpc
- causalDisco
- NetCoupler
- eff2
- mDAG
- pcgen
- BCDAG
- Structure learning in Bayesian networks using regular vines
- Robust Causal Structure Learning with Some Hidden Variables
- Entropy inference and the James-Stein estimator, with application to nonlinear gene association networks
- Objective Bayesian search of Gaussian directed acyclic graphical models for ordered variables with non-local priors
- High-dimensional Gaussian model selection on a Gaussian design
- Separators and adjustment sets in causal graphs: complete criteria and an algorithmic framework
- Penalized estimation of directed acyclic graphs from discrete data
- Learning marginal AMP chain graphs under faithfulness revisited
- Learning causal graphs with latent confounders in weak faithfulness violations
- scientific article; zbMATH DE number 7255130 (Why is no real title available?)
- scientific article; zbMATH DE number 5885097 (Why is no real title available?)
- NlinTS
- scientific article; zbMATH DE number 7306917 (Why is no real title available?)
- clustNet
- SID
- A generalized back-door criterion
- Fast causal orientation learning in directed acyclic graphs
- Marginal integration for nonparametric causal inference
- Penalized likelihood methods for estimation of sparse high-dimensional directed acyclic graphs
- A Bayesian graphical model for ChIP-Seq data on histone modifications
- Learning instrumental variables with structural and non-Gaussianity assumptions
- Scalable multi-output label prediction: from classifier chains to classifier trellises
- \(\ell_{0}\)-penalized maximum likelihood for sparse directed acyclic graphs
- cuPC
- causal-learn
- phsl
- Modelling an energy market with Bayesian networks for non-normal data
- Testing conditional independence in supervised learning algorithms
- Efficient Learning of Quadratic Variance Function Directed Acyclic Graphs via Topological Layers
- scientific article; zbMATH DE number 7306854 (Why is no real title available?)
- Large-scale local causal inference of gene regulatory relationships
- Knowledge transfer for causal discovery
- Bayesian network structural learning from complex survey data: a resampling based approach
- A hybrid Bayesian network learning method for constructing gene networks
- High-dimensional structure estimation in Ising models: local separation criterion
- High-dimensional Ising model selection using \(\ell _{1}\)-regularized logistic regression
- Inferring large graphs using \(\ell_1\)-penalized likelihood
- The three faces of faithfulness
- Copula directed acyclic graphs
- Efficient Sampling and Structure Learning of Bayesian Networks
- Complete graphical characterization and construction of adjustment sets in Markov equivalence classes of ancestral graphs
- Reversible MCMC on Markov equivalence classes of sparse directed acyclic graphs
- Causal network reconstruction from time series: from theoretical assumptions to practical estimation
- Copula grow-shrink algorithm for structural learning
- Estimating high-dimensional intervention effects from observational data
- Causal inference in partially linear structural equation models
- Causal discovery in heavy-tailed models
- A uniformly consistent estimator of causal effects under the k-triangle-faithfulness assumption
- Geometry of the faithfulness assumption in causal inference
- Two optimal strategies for active learning of causal models from interventional data
- Inferring sparse Gaussian graphical models with latent structure
- Learning high-dimensional directed acyclic graphs with latent and selection variables
- A survey on causal discovery: theory and practice
- Compatible priors for model selection of high-dimensional Gaussian DAGs
- Hypersurfaces and their singularities in partial correlation testing
- Estimating high-dimensional directed acyclic graphs with the PC-algorithm
- Testing covariates in high dimension linear regression with latent factors
- Improving Bayesian network local structure learning via data-driven symmetry correction methods
- Learning causal structure from mixed data with missing values using Gaussian copula models
- High-dimensional consistency in score-based and hybrid structure learning
- High dimensional sparse covariance estimation via directed acyclic graphs
- Sparse permutation invariant covariance estimation
- Causal statistical inference in high dimensions
- Bayesian networks. With examples in R
- Structural intervention distance for evaluating causal graphs
- Faithfulness and learning hypergraphs from discrete distributions
- Treelets -- an adaptive multi-scale basis for sparse unordered data
- Testing a single regression coefficient in high dimensional linear models
- A focused information criterion for graphical models
- Concave penalized estimation of sparse Gaussian Bayesian networks
- Estimating bounds on causal effects in high-dimensional and possibly confounded systems
- A local method for identifying causal relations under Markov equivalence
- A Gibbs sampler for learning DAGs
- Partitioned hybrid learning of Bayesian network structures
- Uniform random generation of large acyclic digraphs
- \(\mathsf{PenPC}\): a two-step approach to estimate the skeletons of high-dimensional directed acyclic graphs
- Bayesian network learning via topological order
- Adaptive estimation of covariance matrices via Cholesky decomposition
- Estimation of positive definite M-matrices and structure learning for attractive Gaussian Markov random fields
- Estimating causal structure using conditional DAG models
- Greedy Causal Discovery Is Geometric
- Finding optimal Bayesian network given a super-structure
- From dependency to causality: a machine learning approach
- Ultra-scalable and efficient methods for hybrid observational and experimental local causal pathway discovery
- Inferring gene regulatory networks by an order independent algorithm using incomplete data sets
- Determining full conditional independence by low-order conditioning
- Inferring gene regulatory networks by PCA-CMI using Hill climbing algorithm based on MIT score and SORDER method
- scientific article; zbMATH DE number 7306925 (Why is no real title available?)
- Bayesian networks. With examples in R
- ggm
This page was built for software: pcalg
