rda

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Shrunken Centroids Regularized Discriminant Analysis

Robert Tibshirani, Yaqian Guo, Trevor Hastie

Last update: 2 February 2023

Copyright license: GNU General Public License

Software version identifier: 1.2-1

Source code repository: https://github.com/cran/rda

Cites work

• Regularized linear discriminant analysis and its application in microarrays

Described by source

• Regularized linear discriminant analysis and its application in microarrays

Cited In (99)

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• Stable classification with applications to microarray data
• Two-group classification with high-dimensional correlated data: a factor model approach
• Shrinkage‐based Diagonal Discriminant Analysis and Its Applications in High‐Dimensional Data
• Bayesian variable selection in multinomial probit model for classifying high-dimensional data
• Variational discriminant analysis with variable selection
• Shrinkage-based diagonal Hotelling's tests for high-dimensional small sample size data
• Robust Variable and Interaction Selection for Logistic Regression and General Index Models
• Efficient quadratic regularization for expression arrays
• Regularized orthogonal linear discriminant analysis
• Stability of feature selection in classification issues for high-dimensional correlated data
• High-Dimensional Data Classification
• Penalized model-based clustering
• Covariance-regularized regression and classification for high dimensional problems
• Feature selection in omics prediction problems using cat scores and false nondiscovery rate control
• Classification of biomedical signals for differential diagnosis of Raynaud's phenomenon
• Diagonal Discriminant Analysis With Feature Selection for High-Dimensional Data
• Penalized Classification using Fisher’s Linear Discriminant
• Network linear discriminant analysis
• Robust centroid based classification with minimum error rates for high dimension, low sample size data
• An integrative pathway-based clinical-genomic model for cancer survival prediction
• A new and fast implementation for null space based linear discriminant analysis
• Bayesian Weibull tree models for survival analysis of clinico-genomic data
• Mixtures of Dirichlet-multinomial distributions for supervised and unsupervised classification of short text data
• Surface segmentation for polycube construction based on generalized centroidal Voronoi tessellation
• Novel Fisher discriminant classifiers
• Sparse estimation of large covariance matrices via a nested Lasso penalty
• A study on three linear discriminant analysis based methods in small sample size problem
• On BIC’s selection consistency for discriminant analysis
• Network-based discriminant analysis for multiclassification
• Ensemble quantile classifier
• On maximum depth classifiers: depth distribution approach
• An extensive comparison of recent classification tools applied to microarray data
• Bias-Corrected Diagonal Discriminant Rules for High-Dimensional Classification
• Structured variable selection in support vector machines
• Simultaneous variable selection and class fusion for high-dimensional linear discriminant analysis
• A penalized matrix decomposition, with applications to sparse principal components and canonical correlation analysis
• Feature selection guided by structural information
• Rank discriminants for predicting phenotypes from RNA expression
• Quadratic discriminant analysis by projection
• Classification and clustering of sequencing data using a Poisson model
• A New and Fast Orthogonal Linear Discriminant Analysis on Undersampled Problems
• Characterization of All Solutions for Undersampled Uncorrelated Linear Discriminant Analysis Problems
• Ultrahigh dimensional feature selection: beyond the linear model
• Alternating direction method of multipliers for penalized zero-variance discriminant analysis
• SURE estimates for high dimensional classification
• Robust L1-norm two-dimensional linear discriminant analysis
• Ensemble Kalman filtering with shrinkage regression techniques
• Variable selection via combined penalization for high-dimensional data analysis
• Fast Cross-validation for Multi-penalty High-dimensional Ridge Regression
• cpfa
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• Sparse linear discriminant analysis by thresholding for high dimensional data
• Fuzzy regularized generalized eigenvalue classifier with a novel membership function
• An adaptive multiclass nearest neighbor classifier
• Sparse Bayesian hierarchical modeling of high-dimensional clustering problems
• Sparse linear discriminant analysis in structured covariates space
• Robust groupwise least angle regression
• A weight function method for selection of proteins to predict an outcome using protein expression data
• Modified linear discriminant analysis approaches for classification of high-dimensional microarray data
• Survival prediction using gene expression data: a review and comparison
• Stable estimation of a covariance matrix guided by nuclear norm penalties
• New perspectives on multilocus ancestry informativeness
• Cancer feature selection and classification using a binary quantum-behaved particle swarm optimization and support vector machine
• NetDA: an R package for network-based discriminant analysis subject to multilabel classes
• A method for generating realistic correlation matrices
• The effect of microarray image compression on expression-based classification
• Class prediction by nearest shrunken centroids, with applications to DNA microarrays.
• Semilinear High-Dimensional Model for Normalization of Microarray Data
• Optimal variable selection in multi-group sparse discriminant analysis
• Multiclass analysis and prediction with network structured covariates
• A procedure of linear discrimination analysis with detected sparsity structure for high-dimensional multi-class classification
• Random projections as regularizers: learning a linear discriminant from fewer observations than dimensions
• Bayesian classification for bivariate normal gene expression
• Accuracy of regularized D-rule for binary classification
• Chemometrics with R
• Variational nonparametric discriminant analysis
• New hard-thresholding rules based on data splitting in high-dimensional imbalanced classification
• Classification tree algorithm for grouped variables
• Title not available (Why is that?)
• Gradient boosting for high-dimensional prediction of rare events
• General sparse multi-class linear discriminant analysis
• Sparse HDLSS discrimination with constrained data piling
• Sequential Learning of Regression Models by Penalized Estimation
• NOVELIST estimator of large correlation and covariance matrices and their inverses
• On the dimension effect of regularized linear discriminant analysis
• Performance of Gene Selection and Classification Methods in a Microarray Setting: A Simulation Study
• High-dimensional linear discriminant analysis using nonparametric methods
• On rank distribution classifiers for high-dimensional data
• Double data piling leads to perfect classification
• Two‐way Gaussian mixture models for high dimensional classification
• Sparse regularized discriminant analysis with application to microarrays
• Comparing the linear and quadratic discriminant analysis of diabetes disease classification based on data multicollinearity
• Trace Ratio Optimization for High-Dimensional Multi-Class Discrimination
• The beta-mixture shrinkage prior for sparse covariances with near-minimax posterior convergence rate
• Distance-based outlier detection for high dimension, low sample size data
• Varying coefficient linear discriminant analysis for dynamic data
• Title not available (Why is that?)
• Sparse Covariance Matrix Estimation by DCA-Based Algorithms

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