adephylo

swMATH8303CRANadephyloMaRDI QIDQ20313FDOQ20313

Exploratory Analyses for the Phylogenetic Comparative Method

Stéphane Dray, Thibaut Jombart

Last update: 6 October 2023

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 1.1-13, 1.0-1, 1.0-2, 1.1-0, 1.1-1, 1.1-2, 1.1-3, 1.1-4, 1.1-5, 1.1-6, 1.1-10, 1.1-11, 1.1-16

Source code repository: https://github.com/cran/adephylo

Description

Multivariate tools to analyze comparative data, i.e. a phylogeny and some traits measured for each taxa. The package contains functions to represent comparative data, compute phylogenetic proximities, perform multivariate analysis with phylogenetic constraints and test for the presence of phylogenetic autocorrelation. The package is described in Jombart et al (2010) <doi:10.1093/bioinformatics/btq292>.

Cites work

• adephylo: new tools for investigating the phylogenetic signal in biological traits

Cited In (5)

• Analysis of Phylogenetics and Evolution with R
• Functional and Phylogenetic Ecology in R
• adespatial
• phylosignal
• Putting phylogeny into the analysis of biological traits: a methodological approach

This page was built for software: adephylo