User-friendly interface utilities for MCMC models via Just Another Gibbs Sampler (JAGS), facilitating the use of parallel (or distributed) processors for multiple chains, automated control of convergence and sample length diagnostics, and evaluation of the performance of a model using drop-k validation or against simulated data. Template model specifications can be generated using a standard lme4-style formula interface to assist users less familiar with the BUGS syntax. A JAGS extension module provides additional distributions including the Pareto family of distributions, the DuMouchel prior and the half-Cauchy prior.
Cited in
(52)- Estimation for dynamical systems using a population-based Kalman filter -- applications in computational biology
- ern
- mcmsupply
- neojags
- Modern psychometrics with R
- A comparison of correlation and regression approaches for multinomial processing tree models
- Beating the average forecast: regularization based on forecaster attributes
- Parallel inference for big data with the group Bayesian method
- Power piecewise exponential model for interval-censored data
- Process modeling for slope and aspect with application to elevation data maps
- A comparative study on the performance of frequentist and Bayesian estimation methods under separation in logistic regression
- JAGS
- rjags
- OpenBUGS
- NONMEM
- NADA
- Multitree
- PROC MCMC
- PSM
- rstanarm
- BANOVA
- psychotools
- DHARMa
- TreeBUGS
- jagsUI
- bspmma
- RRreg
- dclone
- blavaan
- bayescount
- iprior
- ProbBayes
- Verdandi
- TCGAbiolinks
- NIMROD
- Data cloning estimation of GARCH and COGARCH models
- edstan
- A Bayesian piecewise linear model for the detection of breakpoints in housing prices
- RoBMA
- RoBSA
- pivmet
- swfscMisc
- BayLum
- Doing Bayesian data analysis. A tutorial introduction with R, JAGS, and Stan
- ordinalbayes
- bfw
- activityGCMM
- MPTmultiverse
- Bayesian comparison of latent variable models: conditional versus marginal likelihoods
- An innovative strategy on the construction of multivariate multimodal linear mixed-effects models
- IsotopeR
- RcmdrPlugin.RMTCJags
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