rrBLUP
swMATH14006CRANrrBLUPMaRDI QIDQ25915FDOQ25915
Ridge Regression and Other Kernels for Genomic Selection
Last update: 10 December 2023
Copyright license: GNU General Public License, version 3.0
Software version identifier: 4.6.2, 1.0, 1.1, 1.2, 1.6, 1.7, 1.8, 2.0, 2.1, 2.2, 2.3, 2.5, 2.7, 2.8, 3.0, 3.1, 3.2, 3.3, 3.4, 3.5, 3.6, 3.7, 3.8, 4.0, 4.1, 4.2, 4.3, 4.4, 4.5, 4.6.1, 4.6, 4.6.3
Source code repository: https://github.com/cran/rrBLUP
Software for genomic prediction with the RR-BLUP mixed model (Endelman 2011, <doi:10.3835/plantgenome2011.08.0024>). One application is to estimate marker effects by ridge regression; alternatively, BLUPs can be calculated based on an additive relationship matrix or a Gaussian kernel.
Cited In (14)
- factReg
- Optimization of selective phenotyping and population design for genomic prediction
- Predicting Rice phenotypes with meta and multi-target learning
- Comparing estimates of genetic variance across different relationship models
- Selection of the bandwidth parameter in a Bayesian kernel regression model for genomic-enabled prediction
- Statistical and computational challenges in whole genome prediction and genome-wide association analyses for plant and animal breeding
- Ghat
- GROAN
- RAINBOWR
- BWGS
- PopVar
- STGS
- Adjusting for spatial effects in genomic prediction
- Do spatial designs outperform classic experimental designs?
This page was built for software: rrBLUP
