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Tools for Approximate Bayesian Computation (ABC)
Blum Michael, Csillery Katalin, Lemaire Louisiane, Francois Olivier
Last update: 19 May 2022
Copyright license: GNU General Public License
Software version identifier: 2.2.1
Official website: https://cran.r-project.org/web/packages/abc/index.html
Source code repository: https://github.com/cran/abc
Cited In (only showing first 100 items - show all)
- Why preferring parametric forecasting to nonparametric methods?
- Calibration procedures for approximate Bayesian credible sets
- Modeling rate of adaptive trait evolution using Cox-Ingersoll-Ross process: an approximate Bayesian computation approach
- RFCDE
- A real-time search strategy for finding urban disease vector infestations
- Direct likelihood-based inference for discretely observed stochastic compartmental models of infectious disease
- Sequential Monte Carlo with adaptive weights for approximate Bayesian computation
- Approximate Bayesian computation for Lorenz curves from grouped data
- Models of coalition or alliance formation
- Birth/birth-death processes and their computable transition probabilities with biological applications
- Qualitative robustness in Bayesian inference
- Approximate Bayesian computational methods for the inference of unknown parameters
- Rapid simulation of spatial epidemics: a spectral method
- Isolation-by-distance-and-time in a stepping-stone model
- ABCtoolbox
- ABC-SubSim
- EasyABC
- abctools
- DiffProc
- AABC
- GPS-ABC
- mvnfast
- TreeSim
- bayestestR
- GEIGER
- queuecomputer
- RaProR
- cosmoabc
- wesanderson
- gk
- DIYABC
- abcrf
- NeuroMorpho
- epiABC
- kedd
- ABC-SysBio
- astroABC
- msBayes
- msABC
- PopABC
- REJECTOR
- Serial SimCoal
- synlik
- ELFI
- elicit-normlin
- horserule
- MATCH Uncertainty Elicitation
- ABCpy
- BSL
- SYSBIONS
- calibration
- qPR
- vabayelMix
- Treevo
- OUOUCIR
- fastsimcoal
- sbi
- metric-learn
- A practical guide to the probability density approximation (PDA) with improved implementation and error characterization
- Bayesian inference of agent-based models: a tool for studying kidney branching morphogenesis
- GLMSELECT
- EpiSimdemics
- Cling
- hpHawkes
- MassiveMDS
- Multilevel approximate Bayesian approaches for flows in highly heterogeneous porous media and their applications
- poems
- A comparative review of dimension reduction methods in approximate Bayesian computation
- Stochastic models for evolving cellular populations of mitochondria: disease, development, and ageing
- Inference of cell-cell interactions from population density characteristics and cell trajectories on static and growing domains
- Bayesian analysis of rare events
- On sequential Monte Carlo, partial rejection control and approximate Bayesian computation
- TreeMHN
- Approximate Bayesian computational methods
- Random projections for Bayesian regression
- ecolottery
- Bayesian computation methods for inference in stochastic kinetic models
- Approximate Bayesian computation and simulation-based inference for complex stochastic epidemic models
- Bayesian model calibration with interpolating polynomials based on adaptively weighted Leja nodes
- Improved approximate Bayesian computation methods via empirical likelihood
- Choosing summary statistics by least angle regression for approximate Bayesian computation
- Auxiliary Likelihood-Based Approximate Bayesian Computation in State Space Models
- Informed sub-sampling MCMC: approximate Bayesian inference for large datasets
- A new approach to choose acceptance cutoff for approximate Bayesian computation
- An ancestral process with selection in an ecological community
- Marginally Calibrated Deep Distributional Regression
- Estimating von Bertalanffy parameters with individual and environmental variations in growth
- An approximate likelihood perspective on ABC methods
- Predicting population extinction from early observations of the Lotka-Volterra system
- Approximation of Bayesian predictive \(p\)-values with regression ABC
- Approximate Bayesian computation for finite mixture models
- Inference via low-dimensional couplings
- Distance-learning for approximate Bayesian computation to model a volcanic eruption
- Goodness of fit for models with intractable likelihood
- Adaptive approximate Bayesian computation tolerance selection
- Forty years of model-based phylogeography
- ABC–CDE: Toward Approximate Bayesian Computation With Complex High-Dimensional Data and Limited Simulations
- A reaction-diffusion system to better comprehend the unlockdown: application of SEIR-type model with diffusion to the spatial spread of COVID-19 in France
- Agent-based modelling for Urban Analytics: State of the art and challenges
- Summary statistics and discrepancy measures for approximate Bayesian computation via surrogate posteriors
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