swMATH16279CRANTMBMaRDI QIDQ28149FDOQ28149
Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'
Last update: 12 December 2023
Copyright license: GNU General Public License, version 2.0
Software version identifier: 1.9.3, 1.9.4, 1.6.1, 1.6.2, 1.6.5, 1.6.6, 1.7.0, 1.7.2, 1.7.4, 1.7.5, 1.7.6, 1.7.7, 1.7.8, 1.7.9, 1.7.10, 1.7.11, 1.7.12, 1.7.13, 1.7.14, 1.7.15, 1.7.16, 1.7.17, 1.7.18, 1.7.19, 1.7.20, 1.7.21, 1.7.22, 1.8.0, 1.8.1, 1.9.0, 1.9.1, 1.9.2, 1.9.5, 1.9.6, 1.9.7, 1.9.8, 1.9.9, 1.9.10
Official website: https://cran.r-project.org/web/packages/TMB/index.html
Source code repository: https://github.com/cran/TMB
With this tool, a user should be able to quickly implement complex random effect models through simple C++ templates. The package combines 'CppAD' (C++ automatic differentiation), 'Eigen' (templated matrix-vector library) and 'CHOLMOD' (sparse matrix routines available from R) to obtain an efficient implementation of the applied Laplace approximation with exact derivatives. Key features are: Automatic sparseness detection, parallelism through 'BLAS' and parallel user templates.
Cited In (only showing first 100 items - show all)
- BAT
- fastGHQuad
- CppAD
- ADMB
- gcmr
- StOCNET
- minqa
- R-INLA
- AD Model Builder
- mvabund
- emdbook
- nleqslv
- Stem
- cts
- GeNIe
- MSBNx
- CollocInfer
- marked
- Program MARK
- RMark
- FKF
- MethComp
- glmmLasso
- unmarked
- QFASA
- roxygen2
- meta4diag
- boral
- mvQuad
- moveHMM
- shinystan
- effects
- secr
- doRNG
- evgam
- marqLevAlg
- Using R for Modelling and Quantitative Methods in Fisheries
- etasFLP
- iLaplace
- FRK
- swim
- nimble
- LibBi
- MSwM
- LMS
- Ceres Solver
- NHMM
- dhglm
- GADM
- crawl
- momentuHMM
- lgcp
- HMSC
- mcglm
- PrevMap
- blme
- trustOptim
- mlt
- geostatsp
- SAS/ETS
- hnp
- hawkes
- mumm
- glmnetUtils
- weathercan
- MULTIFAN-CL
- disaggregation
- glmmTMB
- glmmixedlasso
- tram
- GLMMadaptive
- R2OpenBUGS
- MQMF
- hmmlearn
- swdpwr
- swCRTdesign
- SWSamp
- aghq
- coronavirus
- PHSMM
- inlabru
- CASAL
- spOccupancy
- tmbstan
- elevatr
- glmmrBase
- tramME
- Frequentist delta-variance approximations with mixed-effects models and TMB
- Modelling Ocean temperatures from bio-probes under preferential sampling
- dsem
- phylosem
- RTMB
- Dynamically Rescaled Hamiltonian Monte Carlo for Bayesian Hierarchical Models
- stochvolTMB
- A comparison study on modeling of clustered and overdispersed count data for multiple comparisons
- glmmADMB
- bayesCPM
- Frequentist conditional variance for nonlinear mixed-effects models
- Flexible bivariate Poisson integer-valued GARCH model
- The sibling distribution for multivariate life time data
This page was built for software: TMB
