nodiv

Compares the Distribution of Sister Clades Through a Phylogeny

Last update: 21 August 2023

Copyright license: MIT license, File License

Software version identifier: 1.4.0, 1.4.1, 0.9.1, 0.9.2, 0.9.3, 1.0.0, 1.0.1, 1.0.2, 1.0.3, 1.0.4, 1.1.0, 1.1.1, 1.1.2, 1.1.3, 1.1.4, 1.1.6, 1.1.8, 1.1.9, 1.2.0, 1.3.0, 1.4.2

Source code repository: https://github.com/cran/nodiv

Description

An implementation of the nodiv algorithm, see Borregaard, M.K., Rahbek, C., Fjeldsaa, J., Parra, J.L., Whittaker, R.J. & Graham, C.H. 2014. Node-based analysis of species distributions. Methods in Ecology and Evolution 5(11): 1225-1235. <doi:10.1111/2041-210X.12283>. Package for phylogenetic analysis of species distributions. The main function goes through each node in the phylogeny, compares the distributions of the two descendant nodes, and compares the result to a null model. This highlights nodes where major distributional divergence have occurred. The distributional divergence for these nodes is mapped.

Cites work

Node-based analysis of species distributions