adaptivetau

swMATH17397CRANadaptivetauMaRDI QIDQ29256

Tau-Leaping Stochastic Simulation

Philip Johnson

Last update: 28 November 2023

Copyright license: GNU General Public License

Software version identifier: 2.2-3, 0.9, 0.901, 0.902, 1.0, 1.1-1, 1.1, 2.0, 2.1, 2.2-1, 2.2-2, 2.2, 2.3

Source code repository: https://github.com/cran/adaptivetau

Description

Implements adaptive tau leaping to approximate the trajectory of a continuous-time stochastic process as described by Cao et al. (2007) The Journal of Chemical Physics <doi:10.1063/1.2745299> (aka. the Gillespie stochastic simulation algorithm). This package is based upon work supported by NSF DBI-0906041 and NIH K99-GM104158 to Philip Johnson and NIH R01-AI049334 to Rustom Antia.

Cites work

• Adaptive explicit-implicit tau-leaping method with automatic tau selection

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