mvSLOUCH

Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses

Last update: 20 November 2023

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0, File License

Software version identifier: 2.7.5, 1.0, 1.1.1, 1.1.2, 1.1.3, 1.1.4, 1.1.5, 1.1, 1.2.1, 1.2.2, 1.2, 1.3.1, 1.3.2, 1.3.3, 1.3.4, 1.3, 2.0.0, 2.0.1, 2.0.2, 2.0.3, 2.0.4, 2.0.5, 2.0.6, 2.0.7, 2.1.1, 2.1, 2.2, 2.3, 2.4, 2.5, 2.6.1, 2.6.2, 2.6.3, 2.6.4, 2.6.5, 2.6, 2.7.2, 2.7.3, 2.7.4, 2.7, 2.7.6

Source code repository: https://github.com/cran/mvSLOUCH

Description

Fits multivariate Ornstein-Uhlenbeck types of models to continues trait data from species related by a common evolutionary history. See K. Bartoszek, J, Pienaar, P. Mostad, S. Andersson, T. F. Hansen (2012) <doi:10.1016/j.jtbi.2012.08.005>. The suggested PCMBaseCpp package (which significantly speeds up the likelihood calculations) can be obtained from <https://github.com/venelin/PCMBaseCpp/>.

Cites work

A phylogenetic comparative method for studying multivariate adaptation