pbatR

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Pedigree/Family-Based Genetic Association Tests Analysis and Power

Thomas Hoffmann

Last update: 29 January 2024

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 2.2-16, 0.5.1, 0.6, 0.7, 0.8, 1.0.1, 1.0, 1.1.1, 1.1, 1.2, 1.3.1, 1.3.2, 1.3.4, 1.3, 2.0.1, 2.0.2, 2.1.1, 2.1.2.1, 2.1.2, 2.1.4, 2.1.5, 2.2-0, 2.2-2, 2.2-3, 2.2-5, 2.2-7, 2.2-8, 2.2-9, 2.2-13, 2.2-15, 2.2-17

Source code repository: https://github.com/cran/pbatR

This R package provides power calculations via internal simulation methods. The package also provides a frontend to the now abandoned PBAT program (developed by Christoph Lange), and reads in the corresponding output and displays results and figures when appropriate. The license of this R package itself is GPL. However, to have the program interact with the PBAT program for some functionality of the R package, users must additionally obtain the PBAT program from Christoph Lange, and accept his license. Both the data analysis and power calculations have command line and graphical interfaces using tcltk.




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