genBaRcode

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Software:58042



CRANgenBaRcodeMaRDI QIDQ58042

Analysis and Visualization Tools for Genetic Barcode Data

Lars Thielecke

Last update: 11 December 2023

Software version identifier: 1.2.6, 1.0.0, 1.1.0, 1.2.0, 1.2.2, 1.2.3, 1.2.4, 1.2.5, 1.2.6, 1.2.7


Copyright license: GNU Library General Public License, version 2.0, GNU Lesser General Public License, version 2.1, GNU Lesser General Public License, version 3.0

Provides the necessary functions to identify and extract a selection of already available barcode constructs (Cornils, K. et al. (2014) <doi:10.1093/nar/gku081>) and freely choosable barcode designs from next generation sequence (NGS) data. Furthermore, it offers the possibility to account for sequence errors, the calculation of barcode similarities and provides a variety of visualisation tools (Thielecke, L. et al. (2017) <doi:10.1038/srep43249>).