fastglmpca

CRANfastglmpcaMaRDI QIDQ5977169FDOQ5977169

Fast Algorithms for Generalized Principal Component Analysis

Eric Weine, Peter Carbonetto, Matthew Stephens

Last update: 31 January 2024

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 0.1-103

Description

Implements fast, scalable optimization algorithms for fitting generalized principal components analysis (GLM-PCA) models, as described in "A Generalization of Principal Components Analysis to the Exponential Family" Collins M, Dasgupta S, Schapire RE (2002, ISBN:9780262271738), and subsequently "Feature Selection and Dimension Reduction for Single-Cell RNA-Seq Based on a Multinomial Model" Townes FW, Hicks SC, Aryee MJ, Irizarry RA (2019) <doi:10.1186/s13059-019-1861-6>.

Cites work

• Feature selection and dimension reduction for single-cell RNA-Seq based on a multinomial model

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