GGoutlieR
CRANGGoutlieRMaRDI QIDQ5980968
Identify Individuals with Unusual Geo-Genetic Patterns
Last update: 15 October 2023
Software version identifier: 1.0.0, 1.0.1, 1.0.2
Copyright license: MIT license, File License
Identify and visualize individuals with unusual association patterns of genetics and geography using the approach of Chang and Schmid (2023) <doi:10.1101/2023.04.06.535838>. It detects potential outliers that violate the isolation-by-distance assumption using the K-nearest neighbor approach. You can obtain a table of outliers with statistics and visualize unusual geo-genetic patterns on a geographical map. This is useful for landscape genomics studies to discover individuals with unusual geography and genetics associations from a large biological sample.
