haploR
Query 'HaploReg', 'RegulomeDB'
Ilya Y. Zhbannikov, Konstantin G. Arbeev, Anatoliy I. Yashin
Last update: 9 October 2023
Software version identifier: 1.4.1, 1.4.2, 1.4.4, 1.4.6, 1.5.1, 1.6.0, 1.6.1, 1.6.2, 1.6.4, 2.0.3, 2.0.4, 2.0.5, 2.0.6, 2.0.7, 2.0.9, 3.0.1, 4.0.1, 4.0.2, 4.0.4, 4.0.6, 4.0.7
Copyright license: GNU General Public License, version 3.0
A set of utilities for querying 'HaploReg' <https://pubs.broadinstitute.org/mammals/haploreg/haploreg.php>, 'RegulomeDB' <https://www.regulomedb.org/regulome-search/> web-based tools. The package connects to 'HaploReg', 'RegulomeDB' searches and downloads results, without opening web pages, directly from R environment. Results are stored in a data frame that can be directly used in various kinds of downstream analyses.
