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Calculating Optimum Sampling Effort in Community Ecology

Edlin Guerra-Castro, Arturo Sanchez-Porras

Last update: 18 August 2023

Copyright license: GNU General Public License

Software version identifier: 0.10.2

A system for calculating the optimal sampling effort, based on the ideas of "Ecological cost-benefit optimization" as developed by A. Underwood (1997, ISBN 0 521 55696 1). Data is obtained from simulated ecological communities, and the optimization follows the following procedure of four functions (1) sim_beta() estimates statistical power and type 2 error by using Permutational Multivariate Analysis of Variance, (2) plot_power() represents the results of the previous function, (3) scompvar() calculates the variation components necessary for (4) sim_cbo() to calculate the optimal combination of number of sites and samples depending on either an economical budget or on a desired statistical accuracy.

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