poolABC

CRANpoolABCMaRDI QIDQ5983295FDOQ5983295

Approximate Bayesian Computation with Pooled Sequencing Data

João Carvalho, Vítor C. Sousa

Last update: 8 August 2023

Copyright license: GNU General Public License

Software version identifier: 1.0.0

Description

Provides functions to simulate Pool-seq data under models of demographic formation and to import Pool-seq data from real populations. Implements two ABC algorithms for performing parameter estimation and model selection using Pool-seq data. Cross-validation can also be performed to assess the accuracy of ABC estimates and model choice. Carvalho et al., (2022) <doi:10.1111/1755-0998.13834>.

Cites work

• Integrating Pool‐seq uncertainties into demographic inference

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