jSDM

Joint Species Distribution Models

Jeanne Clément, Ghislain Vieilledent

Last update: 22 July 2023

Copyright license: GNU General Public License, version 3.0

Software version identifier: 0.1.0, 0.2.0, 0.2.1, 0.2.2, 0.2.6

Description

Fits joint species distribution models ('jSDM') in a hierarchical Bayesian framework (Warton and al. 2015 <doi:10.1016/j.tree.2015.09.007>). The Gibbs sampler is written in 'C++'. It uses 'Rcpp', 'Armadillo' and 'GSL' to maximize computation efficiency.

Cites work

So Many Variables: Joint Modeling in Community Ecology

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