microeco

Microbial Community Ecology Data Analysis

Last update: 22 January 2024

Copyright license: GNU General Public License, version 3.0

Software version identifier: 0.15.0, 0.16.0, 0.17.0, 0.19.0, 0.2.1, 0.3.0, 0.3.1, 0.3.3, 0.4.0, 0.5.1, 0.6.0, 0.6.5, 0.7.1, 0.7.5, 0.8.0, 0.9.0, 0.10.0, 0.10.1, 0.11.0, 0.12.0, 0.13.0, 0.14.0, 0.14.1, 0.19.5, 0.20.0, 1.0.0, 1.1.0, 1.2.0, 1.2.2, 1.3.0, 1.4.0

Description

A series of statistical and plotting approaches in microbial community ecology based on the R6 class. The classes are designed for data preprocessing, taxa abundance plotting, alpha diversity analysis, beta diversity analysis, differential abundance test, null model analysis, network analysis, machine learning, environmental data analysis and functional analysis.

Cited In (3)

This page was built for software: microeco