metaGE
CRANmetaGEMaRDI QIDQ71433FDOQ71433
Meta-Analysis for Detecting Genotype x Environment Associations
Annaïg de Walsche, Tristan Mary-Huard
Last update: 28 September 2023
Copyright license: GNU General Public License, version 3.0
Software version identifier: 1.0.0, 1.0.1, 1.0.2, 1.0.3
Meta-analysis of genome-wide association studies for studying Genotype x Environment interactions. The 4 main functions of the package metaGE.collect(), metaGE.cor(), metaGE.fit() and metaGE.test() correspond to 4 steps to perform the meta-analysis: Collecting the results of genome-wide association studies data from different files; Inferring the inter-environment correlation matrix; Performing global test procedure for quantitative trait loci detection (using a Fixed or Random effect model); Performing tests of contrast or meta-regression using an environmental co-factor. (De Walsche, A., et al. (2023) <doi:10.1101/2023.03.01.530237>).
This page was built for software: metaGE
