UNCOVER

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Software:74729



CRANUNCOVERMaRDI QIDQ74729

Utilising Normalisation Constant Optimisation via Edge Removal (UNCOVER)

Samuel Emerson

Last update: 25 August 2023

Copyright license: GNU General Public License, version 2.0

Software version identifier: 1.0.0, 1.1.0

Model data with a suspected clustering structure (either in co-variate space, regression space or both) using a Bayesian product model with a logistic regression likelihood. Observations are represented graphically and clusters are formed through various edge removals or additions. Cluster quality is assessed through the log Bayesian evidence of the overall model, which is estimated using either a Sequential Monte Carlo sampler or a suitable transformation of the Bayesian Information Criterion as a fast approximation of the former. The internal Iterated Batch Importance Sampling scheme (Chopin (2002 <doi:10.1093/biomet/89.3.539>)) is made available as a free standing function.





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