pmparser

Create and Maintain a Relational Database of Data from PubMed/MEDLINE

Josh Schoenbachler, Jake Hughey, Elliot Outland

Last update: 13 January 2024

Copyright license: GNU General Public License, version 2.0

Software version identifier: 1.0.16, 1.0.17, 1.0.4, 1.0.10, 1.0.11, 1.0.13, 1.0.15, 1.0.17, 1.0.18, 1.0.19, 1.0.20

Description

Provides a simple interface for extracting various elements from the publicly available PubMed XML files, incorporating PubMed's regular updates, and combining the data with the NIH Open Citation Collection. See Schoenbachler and Hughey (2021) <doi:10.7717/peerj.11071>.

Cites work

pmparser and PMDB: resources for large-scale, open studies of the biomedical literature

This page was built for software: pmparser