simlandr

CRANsimlandrMaRDI QIDQ76476

Simulation-Based Landscape Construction for Dynamical Systems

Jingmeng Cui

Last update: 23 January 2024

Copyright license: GNU General Public License

Software version identifier: 0.3.0, 0.1.1, 0.1.2, 0.2.0, 0.2.1, 0.3.1

Description

A toolbox for constructing potential landscapes for dynamical systems using Monte Carlo simulation. The method is based on the potential landscape definition by Wang et al. (2008) <doi:10.1073/pnas.0800579105> (also see Zhou & Li, 2016 <doi:10.1063/1.4943096> for further mathematical discussions) and can be used for a large variety of models.

Cites work

• Potential landscape and flux framework of nonequilibrium networks: Robustness, dissipation, and coherence of biochemical oscillations
• Construction of the landscape for multi-stable systems: Potential landscape, quasi-potential, A-type integral and beyond