taxonomizr

Functions to Work with NCBI Accessions and Taxonomy

Last update: 15 December 2023

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0, File License

Software version identifier: 0.10.2, 0.2.2, 0.5.1, 0.5.3, 0.6.0, 0.7.1, 0.8.0, 0.9.2, 0.9.3, 0.10.6

Description

Functions for assigning taxonomy to NCBI accession numbers and taxon IDs based on NCBI's accession2taxid and taxdump files. This package allows the user to download NCBI data dumps and create a local database for fast and local taxonomic assignment.

This page was built for software: taxonomizr