AnanseSeurat

Construct ANANSE GRN-Analysis Seurat

Last update: 11 November 2023

Copyright license: Apache License

Software version identifier: 1.1.0, 1.2.0

Enables gene regulatory network (GRN) analysis on single cell clusters, using the GRN analysis software 'ANANSE', Xu et al.(2021) <doi:10.1093/nar/gkab598>. Export data from 'Seurat' objects, for GRN analysis by 'ANANSE' implemented in 'snakemake'. Finally, incorporate results for visualization and interpretation.

Cites work

ANANSE: an enhancer network-based computational approach for predicting key transcription factors in cell fate determination

This page was built for software: AnanseSeurat