Signac

CRANSignacMaRDI QIDQ85860FDOQ85860

Analysis of Single-Cell Chromatin Data

Tim Stuart, Avi Srivastava

Last update: 8 November 2023

Copyright license: MIT license, File License

Software version identifier: 1.9.0, 1.10.0, 0.2.4, 0.2.5, 1.0.0, 1.1.0, 1.1.1, 1.2.0, 1.2.1, 1.3.0, 1.4.0, 1.5.0, 1.6.0, 1.7.0, 1.8.0, 1.11.0, 1.12.0

Description

A framework for the analysis and exploration of single-cell chromatin data. The 'Signac' package contains functions for quantifying single-cell chromatin data, computing per-cell quality control metrics, dimension reduction and normalization, visualization, and DNA sequence motif analysis. Reference: Stuart et al. (2021) <doi:10.1038/s41592-021-01282-5>.

Cites work

• Single-cell chromatin state analysis with Signac

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