spatialGE

Authors Oscar Ospina, Alex Soupir, Brooke Fridley

Last update 4 June 2025

Copyright license MIT license, File License

Software version identifier PACKAGES.rds, 1.2.0, 1.2.1, 1.2.2

Description

Visualization and analysis of spatially resolved transcriptomics data. The 'spatialGE'R package provides methods for visualizing and analyzing spatially resolved transcriptomics data, such as 10X Visium, CosMx, or csv/tsv gene expression matrices. It includes tools for spatial interpolation, autocorrelation analysis, tissue domain detection, gene set enrichment, and differential expression analysis using spatial mixed models.

This page was built for software: spatialGE