POSTm
type: Item
instance of: R package
software version identifier: 1.2
software version identifier: 1.1
software version identifier: 1.3
maintained by: Shannon T. Holloway
CRAN project: POSTm
programmed in: R
last update: 2023-12-13T00:00:00Z
description: Implements the Phylogeny-Guided Microbiome OTU-Specific Association Test method, which boosts the testing power by adaptively borrowing information from phylogenetically close OTUs (operational taxonomic units) of the target OTU. This method is built on a kernel machine regression framework and allows for flexible modeling of complex microbiome effects, adjustments for covariates, and can accommodate both continuous and binary outcomes.
author: Caizhi Huang
author: Jung-Ying Tzeng
author: Shannon T. Holloway
copyright license: GNU General Public License, version 2.0
depends on software: methods
imports: CompQuadForm
imports: ape
MaRDI profile type: MaRDI software profile
description: Phylogeny-Guided OTU-Specific Association Test for Microbiome Data