Statistics of local complexity in amino acid sequences and sequence databases

DOI10.1016/0097-8485(93)85006-XMaRDI QIDQ4326277zbMATH OpenOpenAlexWikidataFDO

Authors John C. Wootton, Scott Federhen

Publication date 11 April 1995

Published in Computers & Chemistry (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/0097-8485(93)85006-x

Mathematics Subject Classification ID

Computational methods for problems pertaining to biology (92-08) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20)

Cited in

(10)

• Some remarks on protein attribute prediction and pseudo amino acid composition
• iMethyl-STTNC: identification of N\(^6\)-methyladenosine sites by extending the idea of SAAC into Chou's PseAAC to formulate RNA sequences
• \textbf{iLoc-Virus}: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites
• Algorithms for computing lengths of chains in integral partition lattices.
• Entropic fluctuations in DNA sequences
• Visualization and analysis of DNA sequences using DNA walks
• iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
• Low complexity regions (LCRs) contribute to the hypervariability of the HIV-1 gp120 protein
• Markov Additive Processes and Repeats in Sequences
• Unravelling the relationship between protein sequence and low-complexity regions entropies: interactome implications

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