StochKit
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Cited in
(25)- Stochastic reaction networks with input processes: analysis and application to gene expression inference
- GTAEXPRESS
- LDQBD
- BioShape
- ppsim: a software package for efficiently simulating and visualizing population protocols
- Ymer
- Automaton-ABC: a statistical method to estimate the probability of spatio-temporal properties for parametric Markov population models
- BlenX
- COSMOS
- StochKit2
- StochDynTools
- Analyzing Markov chains using Kronecker products. Theory and applications
- Approximation and inference methods for stochastic biochemical kinetics -- a tutorial review
- iNA
- Quantitative biology. Theory, computational methods, and models
- GillespieSSA
- MEANS
- CaliBayes
- Kronecker-Based Infinite Level-Dependent QBD Processes
- Lumping Reductions for Multispread in Multi-Layer Networks
- Bone remodelling in \textsc{BioShape}
- ppsim
- GillesPy2
- Hybrid discrete/continuum algorithms for stochastic reaction networks
- A geometric analysis of fast-slow models for stochastic gene expression
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