Structure- and function-aware substitution matrices via learnable graph matching

DOI10.1007/978-1-0716-3989-4_18MaRDI QIDQ7022821zbMATH OpenFDO

Authors Paolo Pellizzoni, Carlos G. Oliver, Karsten M. Borgwardt

Publication date 24 February 2025

Full work available at URL https://doi.org/10.1007/978-1-0716-3989-4_18

zbMATH Keywords

graph matchinggraph neural networkssubstitution matrices

Mathematics Subject Classification ID

Applications of graph theory (05C90) Artificial neural networks and deep learning (68T07) Biochemistry, molecular biology (92C40)

Cites work

• FR3D: Finding local and composite recurrent structural motifs in RNA 3D structures
• Graph edit distance -- optimal and suboptimal algorithms with applications
• Weisfeiler-Lehman graph kernels

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