The Application of Data Compression-Based Distances to Biological Sequences

DOI10.1007/978-0-387-84816-7_4MaRDI QIDQ3613559zbMATH OpenOpenAlexFDO

Authors Attila Kertesz-Farkas, András Kocsor, Sandor Pongor

Publication date 12 March 2009

Published in Information Theory and Statistical Learning (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-0-387-84816-7_4

Mathematics Subject Classification ID

Coding and information theory (compaction, compression, models of communication, encoding schemes, etc.) (aspects in computer science) (68P30) Nonnumerical algorithms (68W05)

Recommendations

• Common pitfalls using the normalized compression distance: what to watch out for in a compressor
• Clustering by Compression
• Recent Experiences in Parameter-Free Data Mining
• Compression and approximate matching
• Textual data compression in computational biology: algorithmic techniques

Cited in

(2)

• A Compression Model for DNA Multiple Sequence Alignment Blocks
• Textual data compression in computational biology: algorithmic techniques

This page was built for publication: The Application of Data Compression-Based Distances to Biological Sequences

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3613559)