The alignment of protein structures in three dimensions

DOI10.1007/BF02458836MaRDI QIDQ1111963zbMATH OpenWikidataFDO

Authors R. L. Somorjai, Michael Zuker

Publication date 1989

Published in Bulletin of Mathematical Biology (Search for Journal in Brave)

zbMATH Keywords

three dimensionsmolecular biologyprotein structuresalpha-carbonlactalbuminlysozymemolecular sequence comparisonsequence alignments

Mathematics Subject Classification ID

Applications of mathematical programming (90C90) Dynamic programming (90C39) Computational methods for problems pertaining to biology (92-08) Physiological, cellular and medical topics (92Cxx)

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Cites work

• scientific article; zbMATH DE number 3066379 (Why is no real title available?)
• scientific article; zbMATH DE number 3080144 (Why is no real title available?)
• An algorithm for the distance between two finite sequences
• General methods of sequence comparison
• Householder's Method for the Solution of the Algebraic Eigenproblem
• Optimal sequence alignment using affine gap costs
• Stieltjes integration and differential geometry: A model for enzyme recognition, discrimination, and catalysis

Cited in

(4)

• A differential geometric treatment of protein structure comparison
• Comparison of protein secondary structures based on backbone dihedral angles
• Multiple structure alignment based on geometrical correlation of secondary structure elements
• RMSD calculations for comparing protein three-dimensional structures

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