The tri-frame model

DOI10.1016/J.JTBI.2007.12.003MaRDI QIDQ1794356zbMATH OpenOpenAlexWikidataFDO

Authors E. Pienaar, H. J. Viljoen

Publication date 15 October 2018

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL http://europepmc.org/articles/pmc2444053

zbMATH Keywords

mathematical modeltranscriptiontranslationframeshiftingerror prediction

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

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Cites work

• Ribosome kinetics and aa-tRNA competition determine rate and fidelity of peptide synthesis

Cited in

(9)

• Modelling programmed frameshifting with frameshift machines
• \textit{A priori}, \textit{de novo} mathematical exploration of gene expression mechanism via regression viewpoint with briefly cataloged modeling antiquity
• On the stationary frequency of programmed ribosomal \(-1\) frameshift
• A model of protein translation including codon bias, nonsense errors, and ribosome recycling
• The influence of look-ahead on the error rate of transcription
• Cost minimization of ribosomal frameshifts
• The ambush hypothesis at the whole-organism level: off frame, `hidden' stops in vertebrate mitochondrial genes increase developmental stability
• Dynamics of \(+1\) ribosomal frameshifting
• The simplest 3-3-1 model

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