Visualizing regulatory interdependencies and parameter sensitivities in biochemical network models

DOI10.1016/J.MATCOM.2008.02.008MaRDI QIDQ1010012zbMATH OpenOpenAlexFDO

Authors J. Martínez

Publication date 3 April 2009

Published in Mathematics and Computers in Simulation (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.matcom.2008.02.008

zbMATH Keywords

sensitivity analysisnetwork analysisnetwork visualizationmetabolic regulation

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45)

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(3)

• Setting parameters for biological models with ANIMO
• Interactive visualization of gene regulatory networks with associated gene expression time series data
• Dynamic Bayesian sensitivity analysis of a myocardial metabolic model

Describes a project that uses

Uses Software

• MetaVis

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