WayFindR

Authors Kevin R. Coombes, Polina Bombina

Last update 25 September 2026

Software version identifier PACKAGES.rds, 0.1.2, 0.3.1, 0.4.1, 0.5.0, 0.7.0, 0.7.1

Description

Converts pathways from 'WikiPathways' GPML format or 'KEGG' KGML format into 'igraph' objects. Includes tools to find all cycles in the resulting graphs and determine which ones involve negative feedback (inhibition). See <doi:10.1093/nargab/lqag051>.

Cites work

WayFindR: investigating feedback in biological pathways

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