Wright-Fisher construction of the two-parameter Poisson-Dirichlet diffusion

DOI10.1214/16-AAP1252MaRDI QIDQ2403145zbMATH OpenOpenAlexFDO

Authors C. Costantini, Pierpaolo De Blasi, Matteo Ruggiero, Stewart N. Ethier, Dario Spanò

Publication date 15 September 2017

Published in The Annals of Applied Probability (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/1601.06064

zbMATH Keywords

weak convergencemigrationWright-Fisher modelreinforcementinfinite-dimensional diffusion processtwo-parameter Poisson-Dirichlet distribution

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Diffusion processes (60J60) Functional limit theorems; invariance principles (60F17) Random measures (60G57)

Abstract: The two-parameter Poisson--Dirichlet diffusion, introduced in 2009 by Petrov, extends the infinitely-many-neutral-alleles diffusion model, related to Kingman's one-parameter Poisson--Dirichlet distribution and to certain Fleming--Viot processes. The additional parameter has been shown to regulate the clustering structure of the population, but is yet to be fully understood in the way it governs the reproductive process. Here we shed some light on these dynamics by formulating a $K$-allele Wright--Fisher model for a population of size $N$, involving a uniform mutation pattern and a specific state-dependent migration mechanism. Suitably scaled, this process converges in distribution to a $K$-dimensional diffusion process as $Noinfty$. Moreover, the descending order statistics of the $K$-dimensional diffusion converge in distribution to the two-parameter Poisson--Dirichlet diffusion as $Koinfty$. The choice of the migration mechanism depends on a delicate balance between reinforcement and redistributive effects. The proof of convergence to the infinite-dimensional diffusion is nontrivial because the generators do not converge on a core. Our strategy for overcoming this complication is to prove extit{a priori} that in the limit there is no "loss of mass", i.e., that, for each limit point of the sequence of finite-dimensional diffusions (after a reordering of components by size), allele frequencies sum to one.

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(15)

• Countable representation for infinite dimensional diffusions derived from the two-parameter Poisson-Dirichlet process
• Diffusions on a space of interval partitions: the two-parameter model
• Ranked masses in two-parameter Fleming–Viot diffusions
• Diffusions on a space of interval partitions: Poisson-Dirichlet stationary distributions
• A two-parameter family of measure-valued diffusions with Poisson-Dirichlet stationary distributions
• Structure of the condensed phase in the inclusion process
• A dynamic model for the two-parameter Dirichlet process
• Dual process in the two-parameter Poisson-Dirichlet diffusion
• Metrics on sets of interval partitions with diversity
• Wright-Fisher diffusion with negative mutation rates
• Diffusive limits of two-parameter ordered Chinese restaurant process up-down chains
• Clustering dynamics in a class of normalised generalised gamma dependent priors
• Species dynamics in the two-parameter Poisson-Dirichlet diffusion model
• Ordered and size-biased frequencies in GEM and Gibbs' models for species sampling
• Size-biased diffusion limits and the inclusion process

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