renz (Q118030): Difference between revisions
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| Property / last update: 2 December 2021 / rank | |||||||||||||||
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| Property / author: Juan Carlos Aledo / rank | |||||||||||||||
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| Property / maintained by: Juan Carlos Aledo / rank | |||||||||||||||
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| Property / copyright license: GNU General Public License, version 2.0 / rank | |||||||||||||||
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| Property / copyright license: GNU General Public License, version 3.0 / rank | |||||||||||||||
| Property / copyright license: GNU General Public License, version 3.0 / qualifier | |||||||||||||||
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| Property / imports: VGAM / rank | |||||||||||||||
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| Property / cites work: Enzyme kinetic parameters estimation: A tricky task? / rank | |||||||||||||||
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| Property / depends on software: R / rank | |||||||||||||||
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0.2.1 | |||||||||||||||
| Property / software version identifier: 0.2.1 / rank | |||||||||||||||
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| Property / software version identifier: 0.2.1 / qualifier | |||||||||||||||
publication date: 27 November 2023
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27 November 2023
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| Property / last update: 27 November 2023 / rank | |||||||||||||||
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Contains utilities for the analysis of Michaelian kinetic data. Beside the classical linearization methods (Lineweaver-Burk, Eadie-Hofstee, Hanes-Woolf and Eisenthal-Cornish-Bowden), features include the ability to carry out weighted regression analysis that, in most cases, substantially improves the estimation of kinetic parameters (Aledo (2021) <doi:10.1002/bmb.21522>). To avoid data transformation and the potentialbiases introduced by them, the package also offers functions to directly fitting data to the Michaelis-Menten equation, either using ([S], v) or (time, [S]) data. Utilities to simulate substrate progress-curves (making use of the Lambert W function) are also provided. The package is accompanied of vignettes that aim to orientatethe user in the choice of the most suitable method to estimate the kinetic parameter of an Michaelian enzyme. | |||||||||||||||
| Property / description: Contains utilities for the analysis of Michaelian kinetic data. Beside the classical linearization methods (Lineweaver-Burk, Eadie-Hofstee, Hanes-Woolf and Eisenthal-Cornish-Bowden), features include the ability to carry out weighted regression analysis that, in most cases, substantially improves the estimation of kinetic parameters (Aledo (2021) <doi:10.1002/bmb.21522>). To avoid data transformation and the potentialbiases introduced by them, the package also offers functions to directly fitting data to the Michaelis-Menten equation, either using ([S], v) or (time, [S]) data. Utilities to simulate substrate progress-curves (making use of the Lambert W function) are also provided. The package is accompanied of vignettes that aim to orientatethe user in the choice of the most suitable method to estimate the kinetic parameter of an Michaelian enzyme. / rank | |||||||||||||||
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| Property / copyright license | |||||||||||||||
| Property / copyright license: GNU General Public License, version 2.0 / rank | |||||||||||||||
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| Property / copyright license | |||||||||||||||
| Property / copyright license: GNU General Public License, version 3.0 / rank | |||||||||||||||
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| Property / copyright license: GNU General Public License, version 3.0 / qualifier | |||||||||||||||
edition/version: expanded from: GPL (≥ 2) (English) | |||||||||||||||
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| Property / imports: VGAM / rank | |||||||||||||||
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| Property / cites work | |||||||||||||||
| Property / cites work: Enzyme kinetic parameters estimation: A tricky task? / rank | |||||||||||||||
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| Property / maintained by | |||||||||||||||
| Property / maintained by: Juan Carlos Aledo / rank | |||||||||||||||
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| Property / author: Juan Carlos Aledo / rank | |||||||||||||||
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| Property / depends on software: R / qualifier | |||||||||||||||
software version identifier: ≥ 4.0.0 | |||||||||||||||
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| Property / MaRDI profile type: MaRDI software profile / rank | |||||||||||||||
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| links / mardi / name | links / mardi / name | ||||||||||||||
Latest revision as of 18:55, 12 March 2024
R-Enzymology
| Language | Label | Description | Also known as |
|---|---|---|---|
| English | renz |
R-Enzymology |
Statements
27 November 2023
0 references
Contains utilities for the analysis of Michaelian kinetic data. Beside the classical linearization methods (Lineweaver-Burk, Eadie-Hofstee, Hanes-Woolf and Eisenthal-Cornish-Bowden), features include the ability to carry out weighted regression analysis that, in most cases, substantially improves the estimation of kinetic parameters (Aledo (2021) <doi:10.1002/bmb.21522>). To avoid data transformation and the potentialbiases introduced by them, the package also offers functions to directly fitting data to the Michaelis-Menten equation, either using ([S], v) or (time, [S]) data. Utilities to simulate substrate progress-curves (making use of the Lambert W function) are also provided. The package is accompanied of vignettes that aim to orientatethe user in the choice of the most suitable method to estimate the kinetic parameter of an Michaelian enzyme.
0 references
expanded from: GPL (≥ 2) (English)
0 references