protti (Q80360): Difference between revisions

← Older edit

@@ Property / last update @@
-January 2023Timestamp +2023-01-20T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2023-01-20T00:00:00Z
-Timezone
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+Gregorian
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 Before
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@@ Property / last update: 20 January 2023 / rank @@
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@@ Property / imports @@
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@@ Property / imports: lifecycle / rank @@
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@@ Property / imports @@
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@@ Property / imports: methods / rank @@
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@@ Property / imports @@
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@@ Property / imports: stats / rank @@
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@@ Property / imports @@
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@@ Property / imports: rlang / rank @@
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@@ Property / imports @@
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@@ Property / imports: dplyr / rank @@
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@@ Property / imports @@
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@@ Property / imports: stringr / rank @@
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@@ Property / imports @@
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@@ Property / imports: magrittr / rank @@
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@@ Property / imports @@
-data.table
@@ Property / imports: data.table / rank @@
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@@ Property / imports @@
-janitor
@@ Property / imports: janitor / rank @@
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@@ Property / imports @@
-progress
@@ Property / imports: progress / rank @@
-Normal rank
@@ Property / imports @@
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@@ Property / imports: purrr / rank @@
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@@ Property / imports @@
-tidyr
@@ Property / imports: tidyr / rank @@
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@@ Property / imports @@
-forcats
@@ Property / imports: forcats / rank @@
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@@ Property / imports @@
-tibble
@@ Property / imports: tibble / rank @@
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@@ Property / imports @@
-plotly
@@ Property / imports: plotly / rank @@
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@@ Property / imports @@
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@@ Property / imports: ggrepel / rank @@
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@@ Property / imports @@
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@@ Property / imports: grDevices / rank @@
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@@ Property / imports @@
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@@ Property / imports: curl / rank @@
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@@ Property / imports @@
-readr
@@ Property / imports: readr / rank @@
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@@ Property / imports @@
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@@ Property / imports: httr / rank @@
-Normal rank
@@ Property / imports @@
-R.utils
@@ Property / imports: R.utils / rank @@
-Normal rank
@@ Property / cites work @@
-Global analysis of protein structural changes in complex proteomes
-Normal rank
@@ Property / software version identifier @@
+.1.0
@@ Property / software version identifier: 0.1.0 / rank @@
+Normal rank
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Timezone +00:00
Calendar Gregorian
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Timezone +00:00
Calendar Gregorian
Precision 1 day
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-Timestamp
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Timezone +00:00
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Timezone +00:00
Calendar Gregorian
Precision 1 day
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Calendar Gregorian
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After 0
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++2024-02-17T00:00:00Z
-Timezone
++00:00
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+Gregorian
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@@ Property / last update: 17 February 2024 / rank @@
+Normal rank
@@ Property / description @@
+Useful functions and workflows for proteomics quality control and data analysis of both limited proteolysis-coupled mass spectrometry (LiP-MS) (Feng et. al. (2014) <doi:10.1038/nbt.2999>) and regular bottom-up proteomics experiments. Data generated with search tools such as 'Spectronaut', 'MaxQuant' and 'Proteome Discover' can be easily used due to flexibility of functions.
+Normal rank
@@ Property / author @@
+Jan-Philipp Quast
@@ Property / author: Jan-Philipp Quast / rank @@
+Normal rank
@@ Property / author @@
+Dina Schuster
@@ Property / author: Dina Schuster / rank @@
+Normal rank
@@ Property / copyright license @@
+MIT license
@@ Property / copyright license: MIT license / rank @@
+Normal rank
@@ Property / copyright license @@
+File License
@@ Property / copyright license: File License / rank @@
+Normal rank
@@ Property / copyright license: File License / qualifier @@
+URL: https://cran.r-project.org/web/packages/protti/LICENSE
@@ Property / imports @@
+rlang
@@ Property / imports: rlang / rank @@
+Normal rank
@@ Property / imports @@
+dplyr
@@ Property / imports: dplyr / rank @@
+Normal rank
@@ Property / imports @@
+stringr
@@ Property / imports: stringr / rank @@
+Normal rank
@@ Property / imports @@
+magrittr
@@ Property / imports: magrittr / rank @@
+Normal rank
@@ Property / imports @@
+data.table
@@ Property / imports: data.table / rank @@
+Normal rank
@@ Property / imports @@
+janitor
@@ Property / imports: janitor / rank @@
+Normal rank
@@ Property / imports @@
+progress
@@ Property / imports: progress / rank @@
+Normal rank
@@ Property / imports @@
+purrr
@@ Property / imports: purrr / rank @@
+Normal rank
@@ Property / imports @@
+tidyr
@@ Property / imports: tidyr / rank @@
+Normal rank
@@ Property / imports @@
+ggplot2
@@ Property / imports: ggplot2 / rank @@
+Normal rank
@@ Property / imports @@
+forcats
@@ Property / imports: forcats / rank @@
+Normal rank
@@ Property / imports @@
+tibble
@@ Property / imports: tibble / rank @@
+Normal rank
@@ Property / imports @@
+plotly
@@ Property / imports: plotly / rank @@
+Normal rank
@@ Property / imports @@
+ggrepel
@@ Property / imports: ggrepel / rank @@
+Normal rank
@@ Property / imports @@
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@@ Property / imports: utils / rank @@
+Normal rank
@@ Property / imports @@
+grDevices
@@ Property / imports: grDevices / rank @@
+Normal rank
@@ Property / imports @@
+curl
@@ Property / imports: curl / rank @@
+Normal rank
@@ Property / imports @@
+readr
@@ Property / imports: readr / rank @@
+Normal rank
@@ Property / imports @@
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@@ Property / imports: lifecycle / rank @@
+Normal rank
@@ Property / imports @@
+httr
@@ Property / imports: httr / rank @@
+Normal rank
@@ Property / imports @@
+methods
@@ Property / imports: methods / rank @@
+Normal rank
@@ Property / imports @@
+R.utils
@@ Property / imports: R.utils / rank @@
+Normal rank
@@ Property / imports @@
+stats
@@ Property / imports: stats / rank @@
+Normal rank
@@ Property / cites work @@
+Global analysis of protein structural changes in complex proteomes
+Normal rank
@@ Property / depends on software @@
+R
@@ Property / depends on software: R / rank @@
+Normal rank
@@ Property / depends on software: R / qualifier @@
+software version identifier: ≥ 4.0
@@ Property / MaRDI profile type @@
+MaRDI software profile
@@ Property / MaRDI profile type: MaRDI software profile / rank @@
+Normal rank
@@ links / mardi / name / links / mardi / name @@
+Software:80360

Latest revision as of 19:56, 12 March 2024

Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools

Language	Label	Description	Also known as
English	protti	Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools

Statements

instance of

R package

0 references

software version identifier

0.6.0

publication date

20 January 2023

0 references

0.1.0

publication date

23 April 2021

0 references

0.1.1

publication date

10 May 2021

0 references

0.2.0

publication date

17 September 2021

0 references

0.2.1

publication date

11 January 2022

0 references

0.2.2

publication date

8 March 2022

0 references

0.3.0

publication date

12 April 2022

0 references

0.3.1

publication date

1 July 2022

0 references

0.4.0

publication date

8 September 2022

0 references

0.5.0

publication date

29 September 2022

0 references

0.7.0

publication date

17 February 2024

0 references

0 references

0 references

0 references

17 February 2024

0 references

description

Useful functions and workflows for proteomics quality control and data analysis of both limited proteolysis-coupled mass spectrometry (LiP-MS) (Feng et. al. (2014) <doi:10.1038/nbt.2999>) and regular bottom-up proteomics experiments. Data generated with search tools such as 'Spectronaut', 'MaxQuant' and 'Proteome Discover' can be easily used due to flexibility of functions.

0 references

0 references

0 references

0 references

https://cran.r-project.org/web/packages/protti/LICENSE