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Property / last update
28 April 2021
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1.0.0
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publication date: 26 August 2020
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1.0.1
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publication date: 6 October 2020
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1.1.0
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publication date: 13 November 2020
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1.2.1
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publication date: 9 October 2023
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publication date: 6 November 2023
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6 November 2023
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Property / description
 
An open, multi-algorithmic pipeline for easy, fast and efficient analysis of cellular sub-populations and the molecular signatures that characterize them. The pipeline consists of four successive steps: data pre-processing, cellular clustering with pseudo-temporal ordering, defining differential expressed genes and biomarker identification. More details on Ghannoum et. al. (2021) <doi:10.3390/ijms22031399>. This package implements extensions of the work published by Ghannoum et. al. (2019) <doi:10.1101/700989>.
Property / description: An open, multi-algorithmic pipeline for easy, fast and efficient analysis of cellular sub-populations and the molecular signatures that characterize them. The pipeline consists of four successive steps: data pre-processing, cellular clustering with pseudo-temporal ordering, defining differential expressed genes and biomarker identification. More details on Ghannoum et. al. (2021) <doi:10.3390/ijms22031399>. This package implements extensions of the work published by Ghannoum et. al. (2019) <doi:10.1101/700989>. / rank
 
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Property / author: Salim Ghannoum / rank
 
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Property / author: Alvaro Köhn-Luque / rank
 
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Property / author: Waldir Leoncio / rank
 
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Property / copyright license: MIT license / rank
 
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Property / copyright license: File License / rank
 
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Property / depends on software: SingleCellExperiment / rank
 
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Property / depends on software: R / rank
 
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Property / cites work
 
Property / cites work: DIscBIO: A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics / rank
 
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Property / cites work: DIscBIO: a user-friendly pipeline for biomarker discovery in single-cell transcriptomics / rank
 
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Property / MaRDI profile type: MaRDI software profile / rank
 
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links / mardi / namelinks / mardi / name
 

Latest revision as of 19:56, 12 March 2024

A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics
Language Label Description Also known as
English
DIscBIO
A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics

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    1.2.0
    28 April 2021
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    1.0.0
    26 August 2020
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    1.0.1
    6 October 2020
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    1.1.0
    13 November 2020
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    1.2.1
    9 October 2023
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    1.2.2
    6 November 2023
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    6 November 2023
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    An open, multi-algorithmic pipeline for easy, fast and efficient analysis of cellular sub-populations and the molecular signatures that characterize them. The pipeline consists of four successive steps: data pre-processing, cellular clustering with pseudo-temporal ordering, defining differential expressed genes and biomarker identification. More details on Ghannoum et. al. (2021) <doi:10.3390/ijms22031399>. This package implements extensions of the work published by Ghannoum et. al. (2019) <doi:10.1101/700989>.
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