tigger (Q70955): Difference between revisions

← Older edit

@@ Property / last update @@
-September 2022Timestamp +2022-09-20T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
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After 0
-Timestamp
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@@ Property / imports @@
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@@ Property / imports: alakazam / rank @@
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@@ Property / imports: alakazam / qualifier @@
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@@ Property / imports @@
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@@ Property / imports: graphics / rank @@
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@@ Property / imports @@
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@@ Property / imports: parallel / rank @@
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@@ Property / imports @@
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@@ Property / imports: stats / rank @@
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@@ Property / imports @@
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@@ Property / imports: dplyr / rank @@
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@@ Property / imports @@
-doParallel
@@ Property / imports: doParallel / rank @@
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@@ Property / imports @@
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@@ Property / imports: foreach / rank @@
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@@ Property / imports @@
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@@ Property / imports: gridExtra / rank @@
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@@ Property / imports @@
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@@ Property / imports: gtools / rank @@
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@@ Property / imports @@
-iterators
@@ Property / imports: iterators / rank @@
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@@ Property / imports @@
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@@ Property / imports: lazyeval / rank @@
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@@ Property / imports @@
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@@ Property / imports: rlang / rank @@
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@@ Property / imports @@
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@@ Property / imports: stringi / rank @@
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@@ Property / imports @@
-tidyr
@@ Property / imports: tidyr / rank @@
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@@ Property / cites work @@
-Automated analysis of high-throughput B-cell sequencing data reveals a high frequency of novel immunoglobulin V gene segment alleles
-Normal rank
@@ Property / cites work @@
-Identification of Subject-Specific Immunoglobulin Alleles From Expressed Repertoire Sequencing Data
-Normal rank
@@ Property / software version identifier @@
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@@ Property / software version identifier: 0.2.5 / rank @@
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Calendar Gregorian
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After 0
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@@ Property / software version identifier @@
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Timezone +00:00
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@@ Property / software version identifier @@
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@@ Property / last update: 10 October 2023 / rank @@
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@@ Property / description @@
+Infers the V genotype of an individual from immunoglobulin (Ig)    repertoire sequencing data (AIRR-Seq, Rep-Seq). Includes detection of     any novel alleles. This information is then used to correct existing V     allele calls from among the sample sequences.    Citations:    Gadala-Maria, et al (2015) <doi:10.1073/pnas.1417683112>,    Gadala-Maria, et al (2019) <doi:10.3389/fimmu.2019.00129>.
+Normal rank
@@ Property / author @@
+Daniel Gadala-Maria
@@ Property / author: Daniel Gadala-Maria / rank @@
+Normal rank
@@ Property / author @@
+Susanna Marquez
@@ Property / author: Susanna Marquez / rank @@
+Normal rank
@@ Property / author @@
+Moriah Cohen
@@ Property / author: Moriah Cohen / rank @@
+Normal rank
@@ Property / author @@
+Jason vander Heiden
@@ Property / author: Jason vander Heiden / rank @@
+Normal rank
@@ Property / author @@
+Gur Yaari
@@ Property / author: Gur Yaari / rank @@
+Normal rank
@@ Property / author @@
+Steven Kleinstein
@@ Property / author: Steven Kleinstein / rank @@
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@@ Property / copyright license @@
+GNU Affero General Public License, version 3.0
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@@ Property / depends on software @@
+ggplot2
@@ Property / depends on software: ggplot2 / rank @@
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@@ Property / depends on software: R / rank @@
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@@ Property / imports @@
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@@ Property / imports: alakazam / rank @@
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@@ Property / imports: alakazam / qualifier @@
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@@ Property / imports @@
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@@ Property / imports: dplyr / rank @@
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@@ Property / imports: doParallel / rank @@
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@@ Property / imports @@
+foreach
@@ Property / imports: foreach / rank @@
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@@ Property / imports @@
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@@ Property / imports: graphics / rank @@
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@@ Property / imports @@
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@@ Property / imports: gridExtra / rank @@
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@@ Property / imports @@
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@@ Property / imports: gtools / rank @@
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@@ Property / imports @@
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@@ Property / imports: iterators / rank @@
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@@ Property / imports @@
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@@ Property / imports: lazyeval / rank @@
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@@ Property / imports @@
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@@ Property / imports: parallel / rank @@
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@@ Property / imports @@
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@@ Property / imports: rlang / rank @@
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@@ Property / imports @@
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@@ Property / imports: stats / rank @@
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@@ Property / imports @@
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@@ Property / imports: stringi / rank @@
+Normal rank
@@ Property / imports @@
+tidyr
@@ Property / imports: tidyr / rank @@
+Normal rank
@@ Property / imports: tidyr / qualifier @@
+software version identifier: ≥ 1.1.0
@@ Property / imports @@
+utils
@@ Property / imports: utils / rank @@
+Normal rank
@@ Property / cites work @@
+Automated analysis of high-throughput B-cell sequencing data reveals a high frequency of novel immunoglobulin V gene segment alleles
+Normal rank
@@ Property / cites work @@
+Identification of Subject-Specific Immunoglobulin Alleles From Expressed Repertoire Sequencing Data
+Normal rank
@@ Property / MaRDI profile type @@
+MaRDI software profile
@@ Property / MaRDI profile type: MaRDI software profile / rank @@
+Normal rank
@@ links / mardi / name / links / mardi / name @@
+Software:70955

Latest revision as of 18:56, 12 March 2024

Infers Novel Immunoglobulin Alleles from Sequencing Data

Language	Label	Description	Also known as
English	tigger	Infers Novel Immunoglobulin Alleles from Sequencing Data

Statements

instance of

R package

0 references

software version identifier

1.0.1

publication date

20 September 2022

0 references

0.2.5

publication date

8 June 2016

0 references

0.2.7

publication date

25 July 2016

0 references

0.2.8

publication date

28 August 2016

0 references

0.2.9.999

publication date

16 May 2017

0 references

0.2.10

publication date

3 July 2017

0 references

0.2.11

publication date

21 September 2017

0 references

0.3.0

publication date

3 October 2018

0 references

0.3.1

publication date

19 October 2018

0 references

0.4.0

publication date

19 July 2019

0 references

1.0.0

publication date

13 May 2020

0 references

1.1.0

publication date

10 October 2023

0 references

0 references

0 references

10 October 2023

0 references

description

Infers the V genotype of an individual from immunoglobulin (Ig) repertoire sequencing data (AIRR-Seq, Rep-Seq). Includes detection of any novel alleles. This information is then used to correct existing V allele calls from among the sample sequences. Citations: Gadala-Maria, et al (2015) <doi:10.1073/pnas.1417683112>, Gadala-Maria, et al (2019) <doi:10.3389/fimmu.2019.00129>.

0 references

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