WGCNA (Q19178): Difference between revisions

From MaRDI portal
← Older edit
Importer (talk | contribs)
Bots
7,061,357 edits
Swh import (talk | contribs)
Bots
38,380 edits
SWHID from Software Heritage
 
(9 intermediate revisions by 5 users not shown)
Property / last update
18 January 2023
Timestamp+2023-01-18T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
 
Property / last update: 18 January 2023 / rank
Normal rank
 
Property / maintained by
 
Property / maintained by: Peter Langfelder / rank
Normal rank
 
Property / imports
 
Property / imports: Rcpp / rank
Normal rank
 
Property / cites work
 
Property / cites work: A General Framework for Weighted Gene Co-Expression Network Analysis / rank
Normal rank
 
Property / cites work
 
Property / cites work: WGCNA: an R package for weighted correlation network analysis / rank
Normal rank
 
Property / software version identifier
 
0.92-3
Property / software version identifier: 0.92-3 / rank
 
Normal rank
Property / software version identifier: 0.92-3 / qualifier
 
publication date: 26 July 2010
Timestamp+2010-07-26T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
0.93
Property / software version identifier: 0.93 / rank
 
Normal rank
Property / software version identifier: 0.93 / qualifier
 
publication date: 26 August 2010
Timestamp+2010-08-26T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
0.94
Property / software version identifier: 0.94 / rank
 
Normal rank
Property / software version identifier: 0.94 / qualifier
 
publication date: 8 September 2010
Timestamp+2010-09-08T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
0.95
Property / software version identifier: 0.95 / rank
 
Normal rank
Property / software version identifier: 0.95 / qualifier
 
publication date: 17 September 2010
Timestamp+2010-09-17T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
0.96
Property / software version identifier: 0.96 / rank
 
Normal rank
Property / software version identifier: 0.96 / qualifier
 
publication date: 23 September 2010
Timestamp+2010-09-23T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
0.97
Property / software version identifier: 0.97 / rank
 
Normal rank
Property / software version identifier: 0.97 / qualifier
 
publication date: 3 November 2010
Timestamp+2010-11-03T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
0.98
Property / software version identifier: 0.98 / rank
 
Normal rank
Property / software version identifier: 0.98 / qualifier
 
publication date: 13 November 2010
Timestamp+2010-11-13T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
0.99
Property / software version identifier: 0.99 / rank
 
Normal rank
Property / software version identifier: 0.99 / qualifier
 
publication date: 22 December 2010
Timestamp+2010-12-22T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.00
Property / software version identifier: 1.00 / rank
 
Normal rank
Property / software version identifier: 1.00 / qualifier
 
publication date: 15 February 2011
Timestamp+2011-02-15T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.10-2
Property / software version identifier: 1.10-2 / rank
 
Normal rank
Property / software version identifier: 1.10-2 / qualifier
 
publication date: 24 April 2011
Timestamp+2011-04-24T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.11-1
Property / software version identifier: 1.11-1 / rank
 
Normal rank
Property / software version identifier: 1.11-1 / qualifier
 
publication date: 1 June 2011
Timestamp+2011-06-01T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.11-2
Property / software version identifier: 1.11-2 / rank
 
Normal rank
Property / software version identifier: 1.11-2 / qualifier
 
publication date: 6 June 2011
Timestamp+2011-06-06T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.11-3
Property / software version identifier: 1.11-3 / rank
 
Normal rank
Property / software version identifier: 1.11-3 / qualifier
 
publication date: 7 July 2011
Timestamp+2011-07-07T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.11
Property / software version identifier: 1.11 / rank
 
Normal rank
Property / software version identifier: 1.11 / qualifier
 
publication date: 13 May 2011
Timestamp+2011-05-13T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.12
Property / software version identifier: 1.12 / rank
 
Normal rank
Property / software version identifier: 1.12 / qualifier
 
publication date: 17 August 2011
Timestamp+2011-08-17T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.13
Property / software version identifier: 1.13 / rank
 
Normal rank
Property / software version identifier: 1.13 / qualifier
 
publication date: 18 August 2011
Timestamp+2011-08-18T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.14
Property / software version identifier: 1.14 / rank
 
Normal rank
Property / software version identifier: 1.14 / qualifier
 
publication date: 10 November 2011
Timestamp+2011-11-10T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.15
Property / software version identifier: 1.15 / rank
 
Normal rank
Property / software version identifier: 1.15 / qualifier
 
publication date: 12 November 2011
Timestamp+2011-11-12T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.17
Property / software version identifier: 1.17 / rank
 
Normal rank
Property / software version identifier: 1.17 / qualifier
 
publication date: 7 December 2011
Timestamp+2011-12-07T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.18-1
Property / software version identifier: 1.18-1 / rank
 
Normal rank
Property / software version identifier: 1.18-1 / qualifier
 
publication date: 5 January 2012
Timestamp+2012-01-05T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.18-2
Property / software version identifier: 1.18-2 / rank
 
Normal rank
Property / software version identifier: 1.18-2 / qualifier
 
publication date: 13 January 2012
Timestamp+2012-01-13T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.18
Property / software version identifier: 1.18 / rank
 
Normal rank
Property / software version identifier: 1.18 / qualifier
 
publication date: 24 December 2011
Timestamp+2011-12-24T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.19
Property / software version identifier: 1.19 / rank
 
Normal rank
Property / software version identifier: 1.19 / qualifier
 
publication date: 3 March 2012
Timestamp+2012-03-03T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.20
Property / software version identifier: 1.20 / rank
 
Normal rank
Property / software version identifier: 1.20 / qualifier
 
publication date: 24 April 2012
Timestamp+2012-04-24T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.22
Property / software version identifier: 1.22 / rank
 
Normal rank
Property / software version identifier: 1.22 / qualifier
 
publication date: 19 June 2012
Timestamp+2012-06-19T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.23-1
Property / software version identifier: 1.23-1 / rank
 
Normal rank
Property / software version identifier: 1.23-1 / qualifier
 
publication date: 3 August 2012
Timestamp+2012-08-03T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.25-1
Property / software version identifier: 1.25-1 / rank
 
Normal rank
Property / software version identifier: 1.25-1 / qualifier
 
publication date: 9 November 2012
Timestamp+2012-11-09T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.25-2
Property / software version identifier: 1.25-2 / rank
 
Normal rank
Property / software version identifier: 1.25-2 / qualifier
 
publication date: 2 December 2012
Timestamp+2012-12-02T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.25
Property / software version identifier: 1.25 / rank
 
Normal rank
Property / software version identifier: 1.25 / qualifier
 
publication date: 9 November 2012
Timestamp+2012-11-09T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.26
Property / software version identifier: 1.26 / rank
 
Normal rank
Property / software version identifier: 1.26 / qualifier
 
publication date: 7 March 2013
Timestamp+2013-03-07T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.27-1
Property / software version identifier: 1.27-1 / rank
 
Normal rank
Property / software version identifier: 1.27-1 / qualifier
 
publication date: 2 April 2013
Timestamp+2013-04-02T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.34
Property / software version identifier: 1.34 / rank
 
Normal rank
Property / software version identifier: 1.34 / qualifier
 
publication date: 10 October 2013
Timestamp+2013-10-10T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.41-1
Property / software version identifier: 1.41-1 / rank
 
Normal rank
Property / software version identifier: 1.41-1 / qualifier
 
publication date: 14 June 2014
Timestamp+2014-06-14T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.42
Property / software version identifier: 1.42 / rank
 
Normal rank
Property / software version identifier: 1.42 / qualifier
 
publication date: 4 December 2014
Timestamp+2014-12-04T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.43
Property / software version identifier: 1.43 / rank
 
Normal rank
Property / software version identifier: 1.43 / qualifier
 
publication date: 15 January 2015
Timestamp+2015-01-15T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.46
Property / software version identifier: 1.46 / rank
 
Normal rank
Property / software version identifier: 1.46 / qualifier
 
publication date: 28 March 2015
Timestamp+2015-03-28T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.47
Property / software version identifier: 1.47 / rank
 
Normal rank
Property / software version identifier: 1.47 / qualifier
 
publication date: 16 June 2015
Timestamp+2015-06-16T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.48
Property / software version identifier: 1.48 / rank
 
Normal rank
Property / software version identifier: 1.48 / qualifier
 
publication date: 30 October 2015
Timestamp+2015-10-30T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.49
Property / software version identifier: 1.49 / rank
 
Normal rank
Property / software version identifier: 1.49 / qualifier
 
publication date: 29 December 2015
Timestamp+2015-12-29T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.51
Property / software version identifier: 1.51 / rank
 
Normal rank
Property / software version identifier: 1.51 / qualifier
 
publication date: 15 March 2016
Timestamp+2016-03-15T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.60
Property / software version identifier: 1.60 / rank
 
Normal rank
Property / software version identifier: 1.60 / qualifier
 
publication date: 10 July 2017
Timestamp+2017-07-10T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.61
Property / software version identifier: 1.61 / rank
 
Normal rank
Property / software version identifier: 1.61 / qualifier
 
publication date: 5 August 2017
Timestamp+2017-08-05T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.62
Property / software version identifier: 1.62 / rank
 
Normal rank
Property / software version identifier: 1.62 / qualifier
 
publication date: 13 February 2018
Timestamp+2018-02-13T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.63
Property / software version identifier: 1.63 / rank
 
Normal rank
Property / software version identifier: 1.63 / qualifier
 
publication date: 27 February 2018
Timestamp+2018-02-27T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.64-1
Property / software version identifier: 1.64-1 / rank
 
Normal rank
Property / software version identifier: 1.64-1 / qualifier
 
publication date: 11 September 2018
Timestamp+2018-09-11T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.66
Property / software version identifier: 1.66 / rank
 
Normal rank
Property / software version identifier: 1.66 / qualifier
 
publication date: 24 October 2018
Timestamp+2018-10-24T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.67
Property / software version identifier: 1.67 / rank
 
Normal rank
Property / software version identifier: 1.67 / qualifier
 
publication date: 11 April 2019
Timestamp+2019-04-11T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.68
Property / software version identifier: 1.68 / rank
 
Normal rank
Property / software version identifier: 1.68 / qualifier
 
publication date: 23 May 2019
Timestamp+2019-05-23T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.69
Property / software version identifier: 1.69 / rank
 
Normal rank
Property / software version identifier: 1.69 / qualifier
 
publication date: 28 February 2020
Timestamp+2020-02-28T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.70-3
Property / software version identifier: 1.70-3 / rank
 
Normal rank
Property / software version identifier: 1.70-3 / qualifier
 
publication date: 28 February 2021
Timestamp+2021-02-28T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.71
Property / software version identifier: 1.71 / rank
 
Normal rank
Property / software version identifier: 1.71 / qualifier
 
publication date: 23 April 2022
Timestamp+2022-04-23T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / software version identifier
 
1.72-5
Property / software version identifier: 1.72-5 / rank
 
Normal rank
Property / software version identifier: 1.72-5 / qualifier
 
publication date: 7 December 2023
Timestamp+2023-12-07T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / last update
 
7 December 2023
Timestamp+2023-12-07T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
Property / last update: 7 December 2023 / rank
 
Normal rank
Property / maintained by
 
Property / maintained by: Peter Langfelder / rank
 
Normal rank
Property / description
 
Functions necessary to perform Weighted Correlation Network Analysis on high-dimensional data as originally described in Horvath and Zhang (2005) <doi:10.2202/1544-6115.1128> and Langfelder and Horvath (2008) <doi:10.1186/1471-2105-9-559>. Includes functions for rudimentary data cleaning, construction of correlation networks, module identification, summarization, and relating of variables and modules to sample traits. Also includes a number of utility functions for data manipulation and visualization.
Property / description: Functions necessary to perform Weighted Correlation Network Analysis on high-dimensional data as originally described in Horvath and Zhang (2005) <doi:10.2202/1544-6115.1128> and Langfelder and Horvath (2008) <doi:10.1186/1471-2105-9-559>. Includes functions for rudimentary data cleaning, construction of correlation networks, module identification, summarization, and relating of variables and modules to sample traits. Also includes a number of utility functions for data manipulation and visualization. / rank
 
Normal rank
Property / copyright license
 
Property / copyright license: GNU General Public License, version 2.0 / rank
 
Normal rank
Property / copyright license
 
Property / copyright license: GNU General Public License, version 3.0 / rank
 
Normal rank
Property / copyright license: GNU General Public License, version 3.0 / qualifier
 
edition/version: expanded from: GPL (≥ 2) (English)
Property / depends on software
 
Property / depends on software: dynamicTreeCut / rank
 
Normal rank
Property / depends on software: dynamicTreeCut / qualifier
 
Property / depends on software
 
Property / depends on software: fastcluster / rank
 
Normal rank
Property / depends on software
 
Property / depends on software: R / rank
 
Normal rank
Property / depends on software: R / qualifier
 
Property / imports
 
Property / imports: stats / rank
 
Normal rank
Property / imports
 
Property / imports: grDevices / rank
 
Normal rank
Property / imports
 
Property / imports: utils / rank
 
Normal rank
Property / imports
 
Property / imports: matrixStats / rank
 
Normal rank
Property / imports: matrixStats / qualifier
 
Property / imports
 
Property / imports: Hmisc / rank
 
Normal rank
Property / imports
 
Property / imports: impute / rank
 
Normal rank
Property / imports
 
Property / imports: splines / rank
 
Normal rank
Property / imports
 
Property / imports: foreach / rank
 
Normal rank
Property / imports
 
Property / imports: doParallel / rank
 
Normal rank
Property / imports
 
Property / imports: preprocessCore / rank
 
Normal rank
Property / imports
 
Property / imports: survival / rank
 
Normal rank
Property / imports
 
Property / imports: parallel / rank
 
Normal rank
Property / imports
 
Property / imports: GO.db / rank
 
Normal rank
Property / imports
 
Property / imports: AnnotationDbi / rank
 
Normal rank
Property / imports
 
Property / imports: Rcpp / rank
 
Normal rank
Property / imports: Rcpp / qualifier
 
Property / cites work
 
Property / cites work: A General Framework for Weighted Gene Co-Expression Network Analysis / rank
 
Normal rank
Property / cites work
 
Property / cites work: WGCNA: an R package for weighted correlation network analysis / rank
 
Normal rank
Property / MaRDI profile type
 
Property / MaRDI profile type: MaRDI software profile / rank
 
Normal rank
Property / source code repository
 
Property / source code repository: https://github.com/cran/WGCNA / rank
 
Normal rank
Property / Software Heritage ID
 
Property / Software Heritage ID: swh:1:snp:843dcabafb92ba868d9cab948e7415a4a8297a34 / rank
 
Normal rank
Property / Software Heritage ID: swh:1:snp:843dcabafb92ba868d9cab948e7415a4a8297a34 / qualifier
 
Property / Software Heritage ID: swh:1:snp:843dcabafb92ba868d9cab948e7415a4a8297a34 / qualifier
 
point in time: 19 December 2023
Timestamp+2023-12-19T00:00:00Z
Timezone+00:00
CalendarGregorian
Precision1 day
Before0
After0
links / mardi / namelinks / mardi / name
 

Latest revision as of 18:13, 21 March 2024

Weighted Correlation Network Analysis
Language Label Description Also known as
English
WGCNA
Weighted Correlation Network Analysis

    Statements

    instance of
    R package
    0 references
    software version identifier
    1.72-1
    publication date
    18 January 2023
    0 references
    0.92-3
    publication date
    26 July 2010
    0 references
    0.93
    publication date
    26 August 2010
    0 references
    0.94
    publication date
    8 September 2010
    0 references
    0.95
    publication date
    17 September 2010
    0 references
    0.96
    publication date
    23 September 2010
    0 references
    0.97
    publication date
    3 November 2010
    0 references
    0.98
    publication date
    13 November 2010
    0 references
    0.99
    publication date
    22 December 2010
    0 references
    1.00
    publication date
    15 February 2011
    0 references
    1.10-2
    publication date
    24 April 2011
    0 references
    1.11-1
    publication date
    1 June 2011
    0 references
    1.11-2
    publication date
    6 June 2011
    0 references
    1.11-3
    publication date
    7 July 2011
    0 references
    1.11
    publication date
    13 May 2011
    0 references
    1.12
    publication date
    17 August 2011
    0 references
    1.13
    publication date
    18 August 2011
    0 references
    1.14
    publication date
    10 November 2011
    0 references
    1.15
    publication date
    12 November 2011
    0 references
    1.17
    publication date
    7 December 2011
    0 references
    1.18-1
    publication date
    5 January 2012
    0 references
    1.18-2
    publication date
    13 January 2012
    0 references
    1.18
    publication date
    24 December 2011
    0 references
    1.19
    publication date
    3 March 2012
    0 references
    1.20
    publication date
    24 April 2012
    0 references
    1.22
    publication date
    19 June 2012
    0 references
    1.23-1
    publication date
    3 August 2012
    0 references
    1.25-1
    publication date
    9 November 2012
    0 references
    1.25-2
    publication date
    2 December 2012
    0 references
    1.25
    publication date
    9 November 2012
    0 references
    1.26
    publication date
    7 March 2013
    0 references
    1.27-1
    publication date
    2 April 2013
    0 references
    1.34
    publication date
    10 October 2013
    0 references
    1.41-1
    publication date
    14 June 2014
    0 references
    1.42
    publication date
    4 December 2014
    0 references
    1.43
    publication date
    15 January 2015
    0 references
    1.46
    publication date
    28 March 2015
    0 references
    1.47
    publication date
    16 June 2015
    0 references
    1.48
    publication date
    30 October 2015
    0 references
    1.49
    publication date
    29 December 2015
    0 references
    1.51
    publication date
    15 March 2016
    0 references
    1.60
    publication date
    10 July 2017
    0 references
    1.61
    publication date
    5 August 2017
    0 references
    1.62
    publication date
    13 February 2018
    0 references
    1.63
    publication date
    27 February 2018
    0 references
    1.64-1
    publication date
    11 September 2018
    0 references
    1.66
    publication date
    24 October 2018
    0 references
    1.67
    publication date
    11 April 2019
    0 references
    1.68
    publication date
    23 May 2019
    0 references
    1.69
    publication date
    28 February 2020
    0 references
    1.70-3
    publication date
    28 February 2021
    0 references
    1.71
    publication date
    23 April 2022
    0 references
    1.72-5
    publication date
    7 December 2023
    0 references
    programmed in
    R
    0 references
    last update
    7 December 2023
    0 references
    description
    Functions necessary to perform Weighted Correlation Network Analysis on high-dimensional data as originally described in Horvath and Zhang (2005) <doi:10.2202/1544-6115.1128> and Langfelder and Horvath (2008) <doi:10.1186/1471-2105-9-559>. Includes functions for rudimentary data cleaning, construction of correlation networks, module identification, summarization, and relating of variables and modules to sample traits. Also includes a number of utility functions for data manipulation and visualization.
    0 references
    imports
    stats
    0 references
    grDevices
    0 references
    utils
    0 references
    matrixStats
    software version identifier
    ≥ 0.8.1
    0 references
    Hmisc
    0 references
    impute
    0 references
    splines
    0 references
    foreach
    0 references
    doParallel
    0 references
    preprocessCore
    0 references
    survival
    0 references
    parallel
    0 references
    GO.db
    0 references
    AnnotationDbi
    0 references
    Rcpp
    software version identifier
    ≥ 0.11.0
    0 references

    Identifiers

    swMATH work ID
    7123
    0 references
    CRAN project
    WGCNA
    0 references
    Wikidata QID
    Q102537983
    0 references
     
    Retrieved from "https://portal.mardi4nfdi.de/w/index.php?title=Item:Q19178&oldid=33132409"
    Powered by MediaWiki