fastTopics (Q54742): Difference between revisions
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point in time: 22 March 2024
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Latest revision as of 18:48, 22 March 2024
Fast Algorithms for Fitting Topic Models and Non-Negative Matrix Factorizations to Count Data
| Language | Label | Description | Also known as |
|---|---|---|---|
| English | fastTopics |
Fast Algorithms for Fitting Topic Models and Non-Negative Matrix Factorizations to Count Data |
Statements
15 January 2024
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Implements fast, scalable optimization algorithms for fitting topic models ("grade of membership" models) and non-negative matrix factorizations to count data. The methods exploit the special relationship between the multinomial topic model (also, "probabilistic latent semantic indexing") and Poisson non-negative matrix factorization. The package provides tools to compare, annotate and visualize model fits, including functions to efficiently create "structure plots" and identify key features in topics. The 'fastTopics' package is a successor to the 'CountClust' package. Note that the 'fastTopicis' package on GitHub has more vignettes illustrating application to single-cell RNA-seq data.
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